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Publications

2025
Serizay J, Khoury Damaa M, Boudjema AR, Balagué R, Faucourt M, Delgehyr N, Noûs C, Zaragosi LE, Barbry P, Spassky N, Koszul R, Meunier A, Cyclin switch tailors a cell cycle variant to orchestrate multiciliogenesis., Cell Rep 2025 Jan; 44(1): 115103.
2025
Khoury Damaa M, Serizay J, Balagué R, Boudjema AR, Faucourt M, Delgehyr N, Goh KJ, Lu H, Tan EK, James CT, Faucon C, Mitri R, Bracht DC, Bingle CD, Dunn NR, Arnold SJ, Zaragosi LE, Barbry P, Koszul R, Omran H, Gil-Gómez G, Escudier E, Legendre M, Roy S, Spassky N, Meunier A, Cyclin O controls entry into the cell-cycle variant required for multiciliated cell differentiation., Cell Rep 2025 Jan; 44(1): 115117.
2024
Redman E, Fierville M, Cavard A, Plaisant M, Arguel MJ, Ruiz Garcia S, McAndrew EM, Girard-Riboulleau C, Lebrigand K, Magnone V, Ponzio G, Gras D, Chanez P, Abelanet S, Barbry P, Marcet B, Zaragosi LE, Cell Culture Differentiation and Proliferation Conditions Influence the In Vitro Regeneration of the Human Airway Epithelium., Am J Respir Cell Mol Biol 2024 Sep; 71(3): 267-281.
2024
Dougherty GW, Ostrowski LE, Nöthe-Menchen T, Raidt J, Schramm A, Olbrich H, Yin W, Sears PR, Dang H, Smith AJ, Beule AG, Hjeij R, Rutjes N, Haarman EG, Maas SM, Ferkol TW, Noone PG, Olivier KN, Bracht DC, Barbry P, Zaragosi LE, Fierville M, Kliesch S, Wohlgemuth K, König J, George S, Loges NT, Ceppe A, Markovetz MR, Luo H, Guo T, Rizk H, Eldesoky T, Dahlke K, Boldt K, Ueffing M, Hill DB, Pang YP, Knowles MR, Zariwala MA, Omran H, Recessively Inherited Deficiency of Secreted WFDC2 (HE4) Causes Nasal Polyposis and Bronchiectasis., Am J Respir Crit Care Med 2024 Jul; 210(1): 63-76.
2024
Kypraios A, Bennour J, Imbert V, David L, Calvo J, Pflumio F, Bonnet R, Couralet M, Magnone V, Lebrigand K, Barbry P, Rohrlich PS, Peyron JF, Identifying Candidate Gene Drivers Associated with Relapse in Pediatric T-Cell Acute Lymphoblastic Leukemia Using a Gene Co-Expression Network Approach., Cancers (Basel) 2024 Apr; 16(9): .
2024
Zaragosi LE, Gouleau A, Delin M, Lebrigand K, Arguel MJ, Girard-Riboulleau C, Rios G, Redman E, Plaisant M, Waldmann R, Magnone V, Marcet B, Barbry P, Ponzio G, Combination of CRISPR-Cas9-RNP and Single-Cell RNAseq to Identify Cell State-Specific FOXJ1 Functions in the Human Airway Epithelium., Methods Mol Biol 2024 ; 2725(): 1-25.
2024
Truchi M, Lacoux C, Gille C, Fassy J, Magnone V, Lopes Goncalves R, Girard-Riboulleau C, Manosalva-Pena I, Gautier-Isola M, Lebrigand K, Barbry P, Spicuglia S, Vassaux G, Rezzonico R, Barlaud M, Mari B, Detecting subtle transcriptomic perturbations induced by lncRNAs knock-down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network., Front Bioinform 2024 ; 4(): 1340339.
2023
2023
Cavard A, Redman E, Mercey O, Abelanet S, Plaisant M, Arguel MJ, Magnone V, Ruiz García S, Rios G, Deprez M, Lebrigand K, Ponzio G, Caballero I, Barbry P, Zaragosi LE, Marcet B, The MIR34B/C genomic region contains multiple potential regulators of multiciliogenesis., FEBS Lett 2023 Jun; 597(12): 1623-1637.
2023
Guilbaud E, Barouillet T, Ilie M, Borowczyk C, Ivanov S, Sarrazy V, Vaillant N, Ayrault M, Castiglione A, Rignol G, Brest P, Bazioti V, Zaitsev K, Lebrigand K, Dussaud S, Magnone V, Bertolotto C, Marchetti S, Irondelle M, Goldberg I, Huby T, Westerterp M, Gautier EL, Mari B, Barbry P, Hofman P, Yvan-Charvet L, Cholesterol efflux pathways hinder KRAS-driven lung tumor progenitor cell expansion., Cell Stem Cell 2023 Jun; 30(6): 800-817.e9.
2023
Sikkema L, Ramírez-Suástegui C, Strobl DC, Gillett TE, Zappia L, Madissoon E, Markov NS, Zaragosi LE, Ji Y, Ansari M, Arguel MJ, Apperloo L, Banchero M, Bécavin C, Berg M, Chichelnitskiy E, Chung MI, Collin A, Gay ACA, Gote-Schniering J, Hooshiar Kashani B, Inecik K, Jain M, Kapellos TS, Kole TM, Leroy S, Mayr CH, Oliver AJ, von Papen M, Peter L, Taylor CJ, Walzthoeni T, Xu C, Bui LT, De Donno C, Dony L, Faiz A, Guo M, Gutierrez AJ, Heumos L, Huang N, Ibarra IL, Jackson ND, Kadur Lakshminaras..., An integrated cell atlas of the lung in health and disease., Nat Med 2023 Jun; 29(6): 1563-1577.
2023
Zapletalová M, Rancurel C, Industri B, Bardin M, Le Brigand K, Nicot P, Magnone V, Seassau A, Barbry P, Potěšil D, Zdráhal Z, Ponchet M, Lochman J, BABA-induced pathogen resistance: a multi-omics analysis of the tomato response reveals a hyper-receptive status involving ethylene., Hortic Res 2023 Jun; 10(6): uhad068.
2023
2022
Luecken MD, Zaragosi LE, Madissoon E, Sikkema L, Firsova AB, De Domenico E, Kümmerle L, Saglam A, Berg M, Gay ACA, Schniering J, Mayr CH, Abalo XM, Larsson L, Sountoulidis A, Teichmann SA, van Eunen K, Koppelman GH, Saeb-Parsy K, Leroy S, Powell P, Sarkans U, Timens W, Lundeberg J, van den Berge M, Nilsson M, Horváth P, Denning J, Papatheodorou I, Schultze JL, Schiller HB, Barbry P, Petoukhov I, Misharin AV, Adcock IM, von Papen M, Theis FJ, Samakovlis C, Meyer KB, Nawijn MC, The discovAIR project: a roadmap towards the Human Lung Cell Atlas., Eur Respir J 2022 Aug; 60(2): .
2022
Dolfi B, Gallerand A, Firulyova MM, Xu Y, Merlin J, Dumont A, Castiglione A, Vaillant N, Quemener S, Gerke H, Stunault MI, Schrank PR, Kim SH, Zhu A, Ding J, Gilleron J, Magnone V, Barbry P, Dombrowicz D, Duranton C, Wakkach A, Blin-Wakkach C, Becher B, Pagnotta S, Argüello RJ, Rantakari P, Chakarov S, Ginhoux F, Zaitsev K, Kim KW, Yvan-Charvet L, Guinamard RR, Williams JW, Ivanov S, Unravelling the sex-specific diversity and functions of adrenal gland macrophages., Cell Rep 2022 Jun; 39(11): 110949.
2022
Feliz Morel ÁJ, Hasanovic A, Morin A, Prunier C, Magnone V, Lebrigand K, Aouad A, Cogoluegnes S, Favier J, Pasquier C, Mus-Veteau I, Persistent Properties of a Subpopulation of Cancer Cells Overexpressing the Hedgehog Receptor Patched., Pharmaceutics 2022 May; 14(5): .
2021
Luci C, Bihl F, Bourdely P, Khou S, Popa A, Meghraoui-Kheddar A, Vermeulen O, Elaldi R, Poissonnet G, Sudaka A, Bozec A, Bekri S, Cazareth J, Ponzio G, Barbry P, Rezzonico R, Mari B, Braud VM, Anjuère F, Cutaneous Squamous Cell Carcinoma Development Is Associated with a Temporal Infiltration of ILC1 and NK Cells with Immune Dysfunctions., J Invest Dermatol 2021 Oct; 141(10): 2369-2379.
2021
Gallerand A, Stunault MI, Merlin J, Luehmann HP, Sultan DH, Firulyova MM, Magnone V, Khedher N, Jalil A, Dolfi B, Castiglione A, Dumont A, Ayrault M, Vaillant N, Gilleron J, Barbry P, Dombrowicz D, Mack M, Masson D, Bertero T, Becher B, Williams JW, Zaitsev K, Liu Y, Guinamard RR, Yvan-Charvet L, Ivanov S, Brown adipose tissue monocytes support tissue expansion., Nat Commun 2021 Sep; 12(1): 5255.
2021
Arrighi N, Moratal C, Savary G, Fassy J, Nottet N, Pons N, Clément N, Fellah S, Larrue R, Magnone V, Lebrigand K, Pottier N, Dechesne C, Vassaux G, Dani C, Peraldi P, Mari B, The FibromiR miR-214-3p Is Upregulated in Duchenne Muscular Dystrophy and Promotes Differentiation of Human Fibro-Adipogenic Muscle Progenitors., Cells 2021 Jul; 10(7): .
2021
Bui LT, Winters NI, Chung MI, Joseph C, Gutierrez AJ, Habermann AC, Adams TS, Schupp JC, Poli S, Peter LM, Taylor CJ, Blackburn JB, Richmond BW, Nicholson AG, Rassl D, Wallace WA, Rosas IO, Jenkins RG, Kaminski N, Kropski JA, Banovich NE, Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity., Nat Commun 2021 Jul; 12(1): 4314.
2021
Pandiani C, Strub T, Nottet N, Cheli Y, Gambi G, Bille K, Husser C, Dalmasso M, Béranger G, Lassalle S, Magnone V, Pédeutour F, Irondelle M, Maschi C, Nahon-Estève S, Martel A, Caujolle JP, Hofman P, LeBrigand K, Davidson I, Baillif S, Barbry P, Ballotti R, Bertolotto C, Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease., Cell Death Differ 2021 Jun; 28(6): 1990-2000.
2021
Barbry P, Marcet B, Caballero I, Where Is the Cystic Fibrosis Transmembrane Conductance Regulator?, Am J Respir Crit Care Med 2021 May; 203(10): 1214-1216.
2021
Leon LM, Gautier M, Allan R, Ilié M, Nottet N, Pons N, Paquet A, Lebrigand K, Truchi M, Fassy J, Magnone V, Kinnebrew G, Radovich M, Cheok MH, Barbry P, Vassaux G, Marquette CH, Ponzio G, Ivan M, Pottier N, Hofman P, Mari B, Rezzonico R, Correction: The nuclear hypoxia-regulated NLUCAT1 long non-coding RNA contributes to an aggressive phenotype in lung adenocarcinoma through regulation of oxidative stress., Oncogene 2021 Apr; 40(14): 2621.
2021
Muus C, Luecken MD, Eraslan G, Sikkema L, Waghray A, Heimberg G, Kobayashi Y, Vaishnav ED, Subramanian A, Smillie C, Jagadeesh KA, Duong ET, Fiskin E, Torlai Triglia E, Ansari M, Cai P, Lin B, Buchanan J, Chen S, Shu J, Haber AL, Chung H, Montoro DT, Adams T, Aliee H, Allon SJ, Andrusivova Z, Angelidis I, Ashenberg O, Bassler K, Bécavin C, Benhar I, Bergenstråhle J, Bergenstråhle L, Bolt L, Braun E, Bui LT, Callori S, Chaffin M, Chichelnitskiy E, Chiou J, Conlon TM, Cuoco MS, Cuomo ASE, Depre..., Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics., Nat Med 2021 Mar; 27(3): 546-559.
2021
Legendre M, Zaragosi LE, Mitchison HM, Motile cilia and airway disease., Semin Cell Dev Biol 2021 Feb; 110(): 19-33.
2021
Bui LT, Winters NI, Chung MI, Joseph C, Gutierrez AJ, Habermann AC, Adams TS, Schupp JC, Poli S, Peter LM, Taylor CJ, Blackburn JB, Richmond BW, Nicholson AG, Rassl D, Wallace WA, Rosas IO, Jenkins RG, Kaminski N, Kropski JA, Banovich NE, Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity., bioRxiv 2021 Jan; (): .
2021
Fassy J, Lacoux C, Leroy S, Noussair L, Hubac S, Degoutte A, Vassaux G, Leclercq V, Rouquié D, Marquette CH, Rottman M, Touron P, Lemoine A, Herrmann JL, Barbry P, Nahon JL, Zaragosi LE, Mari B, Versatile and flexible microfluidic qPCR test for high-throughput SARS-CoV-2 and cellular response detection in nasopharyngeal swab samples., PLoS One 2021 ; 16(4): e0243333.
2020
Bernardes JP, Mishra N, Tran F, Bahmer T, Best L, Blase JI, Bordoni D, Franzenburg J, Geisen U, Josephs-Spaulding J, Köhler P, Künstner A, Rosati E, Aschenbrenner AC, Bacher P, Baran N, Boysen T, Brandt B, Bruse N, Dörr J, Dräger A, Elke G, Ellinghaus D, Fischer J, Forster M, Franke A, Franzenburg S, Frey N, Friedrichs A, Fuß J, Glück A, Hamm J, Hinrichsen F, Hoeppner MP, Imm S, Junker R, Kaiser S, Kan YH, Knoll R, Lange C, Laue G, Lier C, Lindner M, Marinos G, Markewitz R, Nattermann J, N..., Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19., Immunity 2020 Dec; 53(6): 1296-1314.e9.
2020
Deprez M, Zaragosi LE, Truchi M, Becavin C, Ruiz García S, Arguel MJ, Plaisant M, Magnone V, Lebrigand K, Abelanet S, Brau F, Paquet A, Pe'er D, Marquette CH, Leroy S, Barbry P, A Single-Cell Atlas of the Human Healthy Airways., Am J Respir Crit Care Med 2020 Dec; 202(12): 1636-1645.
2020
Ottaviani A, Eid R, Zoccola D, Pousse M, Dubal JM, Barajas E, Jamet K, Lebrigand K, Lapébie P, Baudoin C, Giraud-Panis MJ, Rouan A, Beauchef G, Guéré C, Vié K, Barbry P, Tambutté S, Gilson E, Allemand D, Longevity strategies in response to light in the reef coral Stylophora pistillata., Sci Rep 2020 Nov; 10(1): 19937.
2020
Castagnola S, Cazareth J, Lebrigand K, Jarjat M, Magnone V, Delhaye S, Brau F, Bardoni B, Maurin T, Agonist-induced functional analysis and cell sorting associated with single-cell transcriptomics characterizes cell subtypes in normal and pathological brain., Genome Res 2020 Nov; 30(11): 1633-1642.
2020
Cambien B, Lebrigand K, Baeri A, Nottet N, Compin C, Lamit A, Ferraris O, Peyrefitte CN, Magnone V, Henriques J, Zaragosi LE, Giorgetti-Peraldi S, Bost F, Gautier-Isola M, Rezzonico R, Barbry P, Barthel R, Mari B, Vassaux G, Identification of oncolytic vaccinia restriction factors in canine high-grade mammary tumor cells using single-cell transcriptomics., PLoS Pathog 2020 Oct; 16(10): e1008660.
2020
Baranek T, Lebrigand K, de Amat Herbozo C, Gonzalez L, Bogard G, Dietrich C, Magnone V, Boisseau C, Jouan Y, Trottein F, Si-Tahar M, Leite-de-Moraes M, Mallevaey T, Paget C, High Dimensional Single-Cell Analysis Reveals iNKT Cell Developmental Trajectories and Effector Fate Decision., Cell Rep 2020 Sep; 32(10): 108116.
2020
Tucker NR, Chaffin M, Bedi KC, Papangeli I, Akkad AD, Arduini A, Hayat S, Eraslan G, Muus C, Bhattacharyya RP, Stegmann CM, , Margulies KB, Ellinor PT, Myocyte-Specific Upregulation of ACE2 in Cardiovascular Disease: Implications for SARS-CoV-2-Mediated Myocarditis., Circulation 2020 Aug; 142(7): 708-710.
2020
Pettit SD, Jerome KR, Rouquié D, Mari B, Barbry P, Kanda Y, Matsumoto M, Hester S, Wehmas L, Botten JW, Bruce EA, ‘All In’: a pragmatic framework for COVID-19 testing and action on a global scale., EMBO Mol Med 2020 Jun; 12(6): e12634.
2020
Ziegler CGK, Allon SJ, Nyquist SK, Mbano IM, Miao VN, Tzouanas CN, Cao Y, Yousif AS, Bals J, Hauser BM, Feldman J, Muus C, Wadsworth MH, Kazer SW, Hughes TK, Doran B, Gatter GJ, Vukovic M, Taliaferro F, Mead BE, Guo Z, Wang JP, Gras D, Plaisant M, Ansari M, Angelidis I, Adler H, Sucre JMS, Taylor CJ, Lin B, Waghray A, Mitsialis V, Dwyer DF, Buchheit KM, Boyce JA, Barrett NA, Laidlaw TM, Carroll SL, Colonna L, Tkachev V, Peterson CW, Yu A, Zheng HB, Gideon HP, Winchell CG, Lin PL, Bingle CD, Snap..., SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues., Cell 2020 May; 181(5): 1016-1035.e19.
2020
Sungnak W, Huang N, Bécavin C, Berg M, Queen R, Litvinukova M, Talavera-López C, Maatz H, Reichart D, Sampaziotis F, Worlock KB, Yoshida M, Barnes JL, SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes., Nat Med 2020 May; 26(5): 681-687.
2020
Zaragosi LE, Deprez M, Barbry P, Using single-cell RNA sequencing to unravel cell lineage relationships in the respiratory tract., Biochem Soc Trans 2020 Feb; 48(1): 327-336.
2019
Fabre A, Marchal S, Barlogis V, Mari B, Barbry P, Rohrlich PS, Forbes LR, Vogel TP, Giovannini-Chami L, Clinical Aspects of STAT3 Gain-of-Function Germline Mutations: A Systematic Review., J Allergy Clin Immunol Pract 2019 ; 7(6): 1958-1969.e9.
2019
Moreno Leon L, Gautier M, Allan R, Ilié M, Nottet N, Pons N, Paquet A, Lebrigand K, Truchi M, Fassy J, Magnone V, Kinnebrew G, Radovich M, Cheok MH, Barbry P, Vassaux G, Marquette CH, Ponzio G, Ivan M, Pottier N, Hofman P, Mari B, Rezzonico R, The nuclear hypoxia-regulated NLUCAT1 long non-coding RNA contributes to an aggressive phenotype in lung adenocarcinoma through regulation of oxidative stress., Oncogene 2019 Nov; 38(46): 7146-7165.
2019
Ruiz García S, Deprez M, Lebrigand K, Cavard A, Paquet A, Arguel MJ, Magnone V, Truchi M, Caballero I, Leroy S, Marquette CH, Marcet B, Barbry P, Zaragosi LE, Novel dynamics of human mucociliary differentiation revealed by single-cell RNA sequencing of nasal epithelial cultures., Development 2019 Oct; 146(20): .
2019
Savary G, Dewaeles E, Diazzi S, Buscot M, Nottet N, Fassy J, Courcot E, Henaoui IS, Lemaire J, Martis N, Van der Hauwaert C, Pons N, Magnone V, Leroy S, Hofman V, Plantier L, Lebrigand K, Paquet A, Lino Cardenas CL, Vassaux G, Hofman P, Günther A, Crestani B, Wallaert B, Rezzonico R, Brousseau T, Glowacki F, Bellusci S, Perrais M, Broly F, Barbry P, Marquette CH, Cauffiez C, Mari B, Pottier N, The Long Noncoding RNA DNM3OS Is a Reservoir of FibromiRs with Major Functions in Lung Fibroblast Response to TGF-β and Pulmonary Fibrosis., Am J Respir Crit Care Med 2019 Jul; 200(2): 184-198.
2018
Revinski DR, Zaragosi LE, Boutin C, Ruiz-Garcia S, Deprez M, Thomé V, Rosnet O, Gay AS, Mercey O, Paquet A, Pons N, Ponzio G, Marcet B, Kodjabachian L, Barbry P, CDC20B is required for deuterosome-mediated centriole production in multiciliated cells., Nat Commun 2018 Nov; 9(1): 4668.
2018
Giovannini-Chami L, Paquet A, Sanfiorenzo C, Pons N, Cazareth J, Magnone V, Lebrigand K, Chevalier B, Vallauri A, Julia V, Marquette CH, Marcet B, Leroy S, Barbry P, The « one airway, one disease » concept in light of Th2 inflammation., Eur Respir J 2018 Oct; 52(4): .
2018
Peter J, De Chiara M, Friedrich A, Yue JX, Pflieger D, Bergström A, Sigwalt A, Barre B, Freel K, Llored A, Cruaud C, Labadie K, Aury JM, Istace B, Lebrigand K, Barbry P, Engelen S, Lemainque A, Wincker P, Liti G, Schacherer J, Genome evolution across 1,011 Saccharomyces cerevisiae isolates., Nature 2018 Apr; 556(7701): 339-344.
2018
Olivia Magnone, Influence de l’écornage sur le comportement du rhinocéros noir (Diceros bicornis) à l’état sauvage L’Influence of dehorning on the behaviour of the black rhinoceros (Diceros bicornis) into the wild, Médecine vétérinaire et santé animale. 2018.
2017
2017
Medina C, da Rocha M, Magliano M, Ratpopoulo A, Revel B, Marteu N, Magnone V, Lebrigand K, Cabrera J, Barcala M, Silva AC, Millar A, Escobar C, Abad P, Favery B, Jaubert-Possamai S, Characterization of microRNAs from Arabidopsis galls highlights a role for miR159 in the plant response to the root-knot nematode Meloidogyne incognita., New Phytol 2017 Nov; 216(3): 882-896.
2017
Bottini S, Hamouda-Tekaya N, Mategot R, Zaragosi LE, Audebert S, Pisano S, Grandjean V, Mauduit C, Benahmed M, Barbry P, Repetto E, Trabucchi M, Post-transcriptional gene silencing mediated by microRNAs is controlled by nucleoplasmic Sfpq., Nat Commun 2017 Oct; 8(1): 1189.
2017
Ponzio G, Rezzonico R, Bourget I, Allan R, Nottet N, Popa A, Magnone V, Rios G, Mari B, Barbry P, A new long noncoding RNA (lncRNA) is induced in cutaneous squamous cell carcinoma and down-regulates several anticancer and cell differentiation genes in mouse., J Biol Chem 2017 Jul; 292(30): 12483-12495.
2017
Pousinha PA, Mouska X, Raymond EF, Gwizdek C, Dhib G, Poupon G, Zaragosi LE, Giudici C, Bethus I, Pacary E, Willem M, Marie H, Physiological and pathophysiological control of synaptic GluN2B-NMDA receptors by the C-terminal domain of amyloid precursor protein., Elife 2017 Jul; 6(): .
2017
Bottini S, Hamouda-Tekaya N, Tanasa B, Zaragosi LE, Grandjean V, Repetto E, Trabucchi M, From benchmarking HITS-CLIP peak detection programs to a new method for identification of miRNA-binding sites from Ago2-CLIP data., Nucleic Acids Res 2017 May; 45(9): e71.
2017
Arguel MJ, LeBrigand K, Paquet A, Ruiz García S, Zaragosi LE, Barbry P, Waldmann R, A cost effective 5΄ selective single cell transcriptome profiling approach with improved UMI design., Nucleic Acids Res 2017 Apr; 45(7): e48.
2017
Mercey O, Popa A, Cavard A, Paquet A, Chevalier B, Pons N, Magnone V, Zangari J, Brest P, Zaragosi LE, Ponzio G, Lebrigand K, Barbry P, Marcet B, Characterizing isomiR variants within the microRNA-34/449 family., FEBS Lett 2017 Mar; 591(5): 693-705.
2016
Beclin C, Follert P, Stappers E, Barral S, Coré N, Chevigny A, Magnone V, Lebrigand K, Bissels U, Huylebroeck D, Bosio A, Barbry P, Seuntjens E, Cremer H, Corrigendum: miR-200 family controls late steps of postnatal forebrain neurogenesis via Zeb2 inhibition., Sci Rep 2016 Dec; 6(): 39368.
2016
Beclin C, Follert P, Stappers E, Barral S, Coré N, de Chevigny A, Magnone V, Lebrigand K, Bissels U, Huylebroeck D, Bosio A, Barbry P, Seuntjens E, Cremer H, miR-200 family controls late steps of postnatal forebrain neurogenesis via Zeb2 inhibition., Sci Rep 2016 Oct; 6(): 35729.
2016
Lassalle S, Zangari J, Popa A, Ilie M, Hofman V, Long E, Patey M, Tissier F, Belléannée G, Trouette H, Catargi B, Peyrottes I, Sadoul JL, Bordone O, Bonnetaud C, Butori C, Bozec A, Guevara N, Santini J, Hénaoui IS, Lemaire G, Blanck O, Vielh P, Barbry P, Mari B, Brest P, Hofman P, MicroRNA-375/SEC23A as biomarkers of the in vitro efficacy of vandetanib., Oncotarget 2016 May; 7(21): 30461-78.
2016
Mercey O, Kodjabachian L, Barbry P, Marcet B, MicroRNAs as key regulators of GTPase-mediated apical actin reorganization in multiciliated epithelia., Small GTPases 2016 Apr; 7(2): 54-8.
2016
2016
2016
Popa A, Lebrigand K, Barbry P, Waldmann R, Pateamine A-sensitive ribosome profiling reveals the scope of translation in mouse embryonic stem cells., BMC Genomics 2016 Jan; 17(): 52.
2015
Mercey O, Chevalier B, Kodjabachian L, Barbry P, Marcet B, [MicroRNAs pull the strings of motile cilia]., Med Sci (Paris) 2015 Dec; 31(12): 1078-80.
2015
Repetto E, Lichtenstein L, Hizir Z, Tekaya N, Benahmed M, Ruidavets JB, Zaragosi LE, Perret B, Bouchareychas L, Genoux A, Lotte R, Ruimy R, Ferrières J, Barbry P, Martinez LO, Trabucchi M, RNY-derived small RNAs as a signature of coronary artery disease., BMC Med 2015 Oct; 13(): 259.
2015
Chevalier B, Adamiok A, Mercey O, Revinski DR, Zaragosi LE, Pasini A, Kodjabachian L, Barbry P, Marcet B, miR-34/449 control apical actin network formation during multiciliogenesis through small GTPase pathways., Nat Commun 2015 Sep; 6(): 8386.
2015
Cibois M, Luxardi G, Chevalier B, Thomé V, Mercey O, Zaragosi LE, Barbry P, Pasini A, Marcet B, Kodjabachian L, BMP signalling controls the construction of vertebrate mucociliary epithelia., Development 2015 Jul; 142(13): 2352-63.
2015
Zaragosi LE, Dadone B, Michiels JF, Marty M, Pedeutour F, Dani C, Bianchini L, Syndecan-1 regulates adipogenesis: new insights in dedifferentiated liposarcoma tumorigenesis., Carcinogenesis 2015 Jan; 36(1): 32-40.
2014
Bertero T, Robbe-Sermesant K, Le Brigand K, Ponzio G, Pottier N, Rezzonico R, Mazure NM, Barbry P, Mari B, MicroRNA target identification: lessons from hypoxamiRs., Antioxid Redox Signal 2014 Sep; 21(8): 1249-68.
2014
Barbry P, Zaragosi LE, An ABC of ciliogenesis., Nat Cell Biol 2014 Sep; 16(9): 826-7.
2013
Bertero T, Bourget-Ponzio I, Puissant A, Loubat A, Mari B, Meneguzzi G, Auberger P, Barbry P, Ponzio G, Rezzonico R, Tumor suppressor function of miR-483-3p on squamous cell carcinomas due to its pro-apoptotic properties., Cell Cycle 2013 Jul; 12(14): 2183-93.
2013
Bertero T, Gastaldi C, Bourget-Ponzio I, Mari B, Meneguzzi G, Barbry P, Ponzio G, Rezzonico R, CDC25A targeting by miR-483-3p decreases CCND-CDK4/6 assembly and contributes to cell cycle arrest., Cell Death Differ 2013 Jun; 20(6): 800-11.
2013
Henaoui IS, Cauffiez C, Aubert S, Buscot M, Dewaeles E, Copin MC, Marquette CH, Barbry P, Perrais M, Pottier N, Mari B, [miR-199a-5p in idiopathic pulmonary fibrosis]., Med Sci (Paris) 2013 May; 29(5): 461-3.
2013
Grosso S, Doyen J, Parks SK, Bertero T, Paye A, Cardinaud B, Gounon P, Lacas-Gervais S, Noël A, Pouysségur J, Barbry P, Mazure NM, Mari B, MiR-210 promotes a hypoxic phenotype and increases radioresistance in human lung cancer cell lines., Cell Death Dis 2013 Mar; 4(3): e544.
2013
Lino Cardenas CL, Henaoui IS, Courcot E, Roderburg C, Cauffiez C, Aubert S, Copin MC, Wallaert B, Glowacki F, Dewaeles E, Milosevic J, Maurizio J, Tedrow J, Marcet B, Lo-Guidice JM, Kaminski N, Barbry P, Luedde T, Perrais M, Mari B, Pottier N, miR-199a-5p Is upregulated during fibrogenic response to tissue injury and mediates TGFbeta-induced lung fibroblast activation by targeting caveolin-1., PLoS Genet 2013 ; 9(2): e1003291.
2012
Rouaud P, Fiancette R, Vincent-Fabert C, Magnone V, Cogné M, Dubus P, Denizot Y, Mantle cell lymphoma-like lymphomas in c-myc-3’RR/p53+/- mice and c-myc-3’RR/Cdk4R24C mice: differential oncogenic mechanisms but similar cellular origin., Oncotarget 2012 May; 3(5): 586-93.
2012
Giovannini-Chami L, Marcet B, Moreilhon C, Chevalier B, Illie MI, Lebrigand K, Robbe-Sermesant K, Bourrier T, Michiels JF, Mari B, Crénesse D, Hofman P, de Blic J, Castillo L, Albertini M, Barbry P, Distinct epithelial gene expression phenotypes in childhood respiratory allergy., Eur Respir J 2012 May; 39(5): 1197-205.
2012
Vincent-Fabert C, Fiancette R, Rouaud P, Baudet C, Truffinet V, Magnone V, Guillaudeau A, Cogné M, Dubus P, Denizot Y, A defect of the INK4-Cdk4 checkpoint and Myc collaborate in blastoid mantle cell lymphoma-like lymphoma formation in mice., Am J Pathol 2012 Apr; 180(4): 1688-701.
2012
Bertero T, Grosso S, Robbe-Sermesant K, Lebrigand K, Hénaoui IS, Puisségur MP, Fourre S, Zaragosi LE, Mazure NM, Ponzio G, Cardinaud B, Barbry P, Rezzonico R, Mari B, « Seed-Milarity » confers to hsa-miR-210 and hsa-miR-147b similar functional activity., PLoS One 2012 ; 7(9): e44919.
2012
Villageois P, Wdziekonski B, Zaragosi LE, Plaisant M, Mohsen-Kanson T, Lay N, Ladoux A, Peraldi P, Dani C, Regulators of human adipose-derived stem cell self-renewal., Am J Stem Cells 2012 ; 1(1): 42-7.
2011
Fiancette R, Rouaud P, Vincent-Fabert C, Laffleur B, Magnone V, Cogné M, Denizot Y, A p53 defect sensitizes various stages of B cell development to lymphomagenesis in mice carrying an IgH 3′ regulatory region-driven c-myc transgene., J Immunol 2011 Dec; 187(11): 5772-82.
2011
Marcet B, Chevalier B, Coraux C, Kodjabachian L, Barbry P, MicroRNA-based silencing of Delta/Notch signaling promotes multiple cilia formation., Cell Cycle 2011 Sep; 10(17): 2858-64.
2011
Zaragosi LE, Wdziekonski B, Brigand KL, Villageois P, Mari B, Waldmann R, Dani C, Barbry P, Small RNA sequencing reveals miR-642a-3p as a novel adipocyte-specific microRNA and miR-30 as a key regulator of human adipogenesis., Genome Biol 2011 Jul; 12(7): R64.
2011
Simonet T, Zaragosi LE, Philippe C, Lebrigand K, Schouteden C, Augereau A, Bauwens S, Ye J, Santagostino M, Giulotto E, Magdinier F, Horard B, Barbry P, Waldmann R, Gilson E, The human TTAGGG repeat factors 1 and 2 bind to a subset of interstitial telomeric sequences and satellite repeats., Cell Res 2011 Jul; 21(7): 1028-38.
2011
Ganot P, Moya A, Magnone V, Allemand D, Furla P, Sabourault C, Adaptations to endosymbiosis in a cnidarian-dinoflagellate association: differential gene expression and specific gene duplications., PLoS Genet 2011 Jul; 7(7): e1002187.
2011
Marcet B, Chevalier B, Luxardi G, Coraux C, Zaragosi LE, Cibois M, Robbe-Sermesant K, Jolly T, Cardinaud B, Moreilhon C, Giovannini-Chami L, Nawrocki-Raby B, Birembaut P, Waldmann R, Kodjabachian L, Barbry P, Control of vertebrate multiciliogenesis by miR-449 through direct repression of the Delta/Notch pathway., Nat Cell Biol 2011 Jun; 13(6): 693-9.
2011
Puisségur MP, Mazure NM, Bertero T, Pradelli L, Grosso S, Robbe-Sermesant K, Maurin T, Lebrigand K, Cardinaud B, Hofman V, Fourre S, Magnone V, Ricci JE, Pouysségur J, Gounon P, Hofman P, Barbry P, Mari B, miR-210 is overexpressed in late stages of lung cancer and mediates mitochondrial alterations associated with modulation of HIF-1 activity., Cell Death Differ 2011 Mar; 18(3): 465-78.
2011
Giovannini-Chami L, Grandvaux N, Zaragosi LE, Robbe-Sermesant K, Marcet B, Cardinaud B, Coraux C, Berthiaume Y, Waldmann R, Mari B, Barbry P, Impact of microRNA in normal and pathological respiratory epithelia., Methods Mol Biol 2011 ; 741(): 171-91.
2011
Chevalier B, Kodjabachian L, Coraux C, Barbry P, Marcet B, [MicroRNA control biosynthesis of motile cilia in vertebrates]., Med Sci (Paris) 2011 ; 27(6-7): 671-3.
2010
Zaragosi LE, Wdziekonski B, Villageois P, Keophiphath M, Maumus M, Tchkonia T, Bourlier V, Mohsen-Kanson T, Ladoux A, Elabd C, Scheideler M, Trajanoski Z, Takashima Y, Amri EZ, Lacasa D, Sengenes C, Ailhaud G, Clément K, Bouloumie A, Kirkland JL, Dani C, Activin a plays a critical role in proliferation and differentiation of human adipose progenitors., Diabetes 2010 Oct; 59(10): 2513-21.
2009
Emboulé L, Daigle F, Meyer DF, Mari B, Pinarello V, Sheikboudou C, Magnone V, Frutos R, Viari A, Barbry P, Martinez D, Lefrançois T, Vachiéry N, Innovative approach for transcriptomic analysis of obligate intracellular pathogen: selective capture of transcribed sequences of Ehrlichia ruminantium., BMC Mol Biol 2009 Dec; 10(): 111.
2009
Pottier N, Maurin T, Chevalier B, Puisségur MP, Lebrigand K, Robbe-Sermesant K, Bertero T, Lino Cardenas CL, Courcot E, Rios G, Fourre S, Lo-Guidice JM, Marcet B, Cardinaud B, Barbry P, Mari B, Identification of keratinocyte growth factor as a target of microRNA-155 in lung fibroblasts: implication in epithelial-mesenchymal interactions., PLoS One 2009 Aug; 4(8): e6718.
2009
2009
Relvas LJ, Bouffioux C, Marcet B, Communi D, Makhoul M, Horckmans M, Blero D, Bruyns C, Caspers L, Boeynaems JM, Willermain F, Extracellular nucleotides and interleukin-8 production by ARPE cells: potential role of danger signals in blood-retinal barrier activation., Invest Ophthalmol Vis Sci 2009 Mar; 50(3): 1241-6.
2009
L Emboule, F Daigle, R Frutos, D Meyer, Alain Viari, Valérie Pinarello, S Christian, V Magnone, Bernard Mari, P Barbry, D Martinez, Thierry Lefrançois, Nathalie Vachiery, High throughput analysis of Ehrlichia ruminantium transcriptome: identification of genes involved in virulence, 3rd Congress of European Microbiologist - FEMS, 2009, Gothenburg, Sweden. pp.Inconnu.
2009
E Vautor, V Magnone, G Rios, K Le Brigand, Dominique Bergonier, Gérard Lina, H Meugnier, P Barbry, Richard Thiéry, Michel Pepin, Genetic differences among Staphylococcus aureus isolates from dairy ruminant species: A single-dye DNA microarray approach, Veterinary Microbiology, 2009, 133 (1-2), pp.105-114.
2008
Elabd C, Basillais A, Beaupied H, Breuil V, Wagner N, Scheideler M, Zaragosi LE, Massiéra F, Lemichez E, Trajanoski Z, Carle G, Euller-Ziegler L, Ailhaud G, Benhamou CL, Dani C, Amri EZ, Oxytocin controls differentiation of human mesenchymal stem cells and reverses osteoporosis., Stem Cells 2008 Sep; 26(9): 2399-407.
2008
Scheideler M, Elabd C, Zaragosi LE, Chiellini C, Hackl H, Sanchez-Cabo F, Yadav S, Duszka K, Friedl G, Papak C, Prokesch A, Windhager R, Ailhaud G, Dani C, Amri EZ, Trajanoski Z, Comparative transcriptomics of human multipotent stem cells during adipogenesis and osteoblastogenesis., BMC Genomics 2008 Jul; 9(): 340.
2008
Zaragosi LE, Wdziekonski B, Fontaine C, Villageois P, Peraldi P, Dani C, Effects of GSK3 inhibitors on in vitro expansion and differentiation of human adipose-derived stem cells into adipocytes., BMC Cell Biol 2008 Feb; 9(): 11.
2007
Pottier N, Chupin C, Defamie V, Cardinaud B, Sutherland R, Rios G, Gauthier F, Wolters PJ, Berthiaume Y, Barbry P, Mari B, Relationships between early inflammatory response to bleomycin and sensitivity to lung fibrosis: a role for dipeptidyl-peptidase I and tissue inhibitor of metalloproteinase-3?, Am J Respir Crit Care Med 2007 Dec; 176(11): 1098-107.
2007
Elabd C, Chiellini C, Massoudi A, Cochet O, Zaragosi LE, Trojani C, Michiels JF, Weiss P, Carle G, Rochet N, Dechesne CA, Ailhaud G, Dani C, Amri EZ, Human adipose tissue-derived multipotent stem cells differentiate in vitro and in vivo into osteocyte-like cells., Biochem Biophys Res Commun 2007 Sep; 361(2): 342-8.
2007
Marcet B, Libert F, Boeynaems JM, Communi D, Extracellular nucleotides induce COX-2 up-regulation and prostaglandin E2 production in human A549 alveolar type II epithelial cells., Eur J Pharmacol 2007 Jul; 566(1-3): 167-71.
2007
Marcet B, Horckmans M, Libert F, Hassid S, Boeynaems JM, Communi D, Extracellular nucleotides regulate CCL20 release from human primary airway epithelial cells, monocytes and monocyte-derived dendritic cells., J Cell Physiol 2007 Jun; 211(3): 716-27.
2007
Zaragosi LE, Billon N, Ailhaud G, Dani C, Nucleofection is a valuable transfection method for transient and stable transgene expression in adipose tissue-derived stem cells., Stem Cells 2007 Mar; 25(3): 790-7.
2006
Marcet B, Boeynaems JM, Relationships between cystic fibrosis transmembrane conductance regulator, extracellular nucleotides and cystic fibrosis., Pharmacol Ther 2006 Dec; 112(3): 719-32.
2006
Zaragosi LE, Ailhaud G, Dani C, Autocrine fibroblast growth factor 2 signaling is critical for self-renewal of human multipotent adipose-derived stem cells., Stem Cells 2006 Nov; 24(11): 2412-9.
2006
Albrecht V, Chevallier A, Magnone V, Barbry P, Vandenbos F, Bongain A, Lefebvre JC, Giordanengo V, Easy and fast detection and genotyping of high-risk human papillomavirus by dedicated DNA microarrays., J Virol Methods 2006 Nov; 137(2): 236-44.
2006
Le Brigand K, Russell R, Moreilhon C, Rouillard JM, Jost B, Amiot F, Magnone V, Bole-Feysot C, Rostagno P, Virolle V, Defamie V, Dessen P, Williams G, Lyons P, Rios G, Mari B, Gulari E, Kastner P, Gidrol X, Freeman TC, Barbry P, An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes., Nucleic Acids Res 2006 Jul; 34(12): e87.
2006
Horckmans M, Marcet B, Marteau F, Bulté F, Maho A, Parmentier M, Boeynaems JM, Communi D, Extracellular adenine nucleotides inhibit the release of major monocyte recruiters by human monocyte-derived dendritic cells., FEBS Lett 2006 Feb; 580(3): 747-54.
2005
Matarazzo V, Clot-Faybesse O, Marcet B, Guiraudie-Capraz G, Atanasova B, Devauchelle G, Cerutti M, Etiévant P, Ronin C, Functional characterization of two human olfactory receptors expressed in the baculovirus Sf9 insect cell system., Chem Senses 2005 Mar; 30(3): 195-207.
2005
Moreilhon C, Gras D, Hologne C, Bajolet O, Cottrez F, Magnone V, Merten M, Groux H, Puchelle E, Barbry P, Live Staphylococcus aureus and bacterial soluble factors induce different transcriptional responses in human airway cells., Physiol Genomics 2005 Feb; 20(3): 244-55.
2005
V. Matarazzo, Olivier Clot-Faybesse, B. Marcet, Gaelle Guiraudie-Capraz, B. Atanasova, G. Devauchelle, M. Cerutti, P. Etiévant, Catherine Ronin, Functional characterization of two human olfactory receptors expressed in the baculovirus Sf9 insect cell system, Chemical Senses, 2005, 30, pp.195-207.
2005
V. Matarazzo, Olivier Clot-Faybesse, B. Marcet, Gaelle Guiraudie-Capraz, Boriana Atanasova, O. Devauchelle, M. Cerutti, Patrick Etiévant, C. Ronin, Functional characterization of two human olfactory receptors expressed in the baculovirus Sf9 insect cell system, Chemical Senses, 2005, 30, pp.195-207.
2005
Olivier Clos-Faybesse, V. Matarazzo, B. Marcet, G. Guiraudie-Capraz, G. Devauchelle, P. Etievant, M. Cerutti, C. Ronin, Functional expression of two olfactory receptors in the Baculovirus/insect system, Chemical Senses, 2005, 30, pp.195-207.
2004
Marcet B, Chappe V, Delmas P, Verrier B, Pharmacological and signaling properties of endogenous P2Y1 receptors in cystic fibrosis transmembrane conductance regulator-expressing Chinese hamster ovary cells., J Pharmacol Exp Ther 2004 May; 309(2): 533-9.
2004
Marcet B, Becq F, Norez C, Delmas P, Verrier B, General anesthetic octanol and related compounds activate wild-type and delF508 cystic fibrosis chloride channels., Br J Pharmacol 2004 Mar; 141(6): 905-14.
2004
B. Marcet, F. Becq, C. Norez, P. Delmas, Bernard Verrier, General anesthetic octanol and related compounds activate wild-type and delF508 cystic fibrosis chloride channels., British Journal of Pharmacology, 2004, 919, pp.919.
2004
B. Marcet, V. Chappe, P. Delmas, Bernard Verrier, Pharmacological and signaling properties of endogenous P2Y1 receptors in cystic fibrosis transmembrane conductance regulator-expressing chinese hamster overy cells., Journal of Pharmacology and Experimental Therapeutics, 2004, pp.542.
2003
Roubertoux PL, Sluyter F, Carlier M, Marcet B, Maarouf-Veray F, Chérif C, Marican C, Arrechi P, Godin F, Jamon M, Verrier B, Cohen-Salmon C, Mitochondrial DNA modifies cognition in interaction with the nuclear genome and age in mice., Nat Genet 2003 Sep; 35(1): 65-9.
2003
Dayem MA, Moreilhon C, Turchi L, Magnone V, Christen R, Ponzio G, Barbry P, Early gene expression in wounded human keratinocytes revealed by DNA microarray analysis., Comp Funct Genomics 2003 ; 4(1): 47-55.
2000
Patel AJ, Maingret F, Magnone V, Fosset M, Lazdunski M, Honoré E, TWIK-2, an inactivating 2P domain K+ channel., J Biol Chem 2000 Sep; 275(37): 28722-30.