Virginie MAGNONE – IPMC

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Publications

Redman E, Fierville M, Cavard A, Plaisant M, Arguel MJ, Ruiz Garcia S, McAndrew EM, Girard-Riboulleau C, Lebrigand K, Magnone V, Ponzio G, Gras D, Chanez P, Abelanet S, Barbry P, Marcet B, Zaragosi LE, Cell Culture Differentiation and Proliferation Conditions Influence the In Vitro Regeneration of the Human Airway Epithelium., Am J Respir Cell Mol Biol 2024 Sep; 71(3): 267-281.

Kypraios A, Bennour J, Imbert V, David L, Calvo J, Pflumio F, Bonnet R, Couralet M, Magnone V, Lebrigand K, Barbry P, Rohrlich PS, Peyron JF, Identifying Candidate Gene Drivers Associated with Relapse in Pediatric T-Cell Acute Lymphoblastic Leukemia Using a Gene Co-Expression Network Approach., Cancers (Basel) 2024 Apr; 16(9): .

Zaragosi LE, Gouleau A, Delin M, Lebrigand K, Arguel MJ, Girard-Riboulleau C, Rios G, Redman E, Plaisant M, Waldmann R, Magnone V, Marcet B, Barbry P, Ponzio G, Combination of CRISPR-Cas9-RNP and Single-Cell RNAseq to Identify Cell State-Specific FOXJ1 Functions in the Human Airway Epithelium., Methods Mol Biol 2024 ; 2725(): 1-25.

Truchi M, Lacoux C, Gille C, Fassy J, Magnone V, Lopes Goncalves R, Girard-Riboulleau C, Manosalva-Pena I, Gautier-Isola M, Lebrigand K, Barbry P, Spicuglia S, Vassaux G, Rezzonico R, Barlaud M, Mari B, Detecting subtle transcriptomic perturbations induced by lncRNAs knock-down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network., Front Bioinform 2024 ; 4(): 1340339.

Daniela Matuozzo, Estelle Talouarn, Astrid Marchal, Peng Zhang, Jeremy Manry, Yoann Seeleuthner, Yu Zhang, Alexandre Bolze, Matthieu Chaldebas, Baptiste Milisavljevic, Adrian Gervais, Paul Bastard, Takaki Asano, Lucy Bizien, Federica Barzaghi, Hassan Abolhassani, Ahmad Abou Tayoun, Alessandro Aiuti, Ilad Alavi Darazam, Luis Allende, Rebeca Alonso-Arias, Andrés Augusto Arias, Gokhan Aytekin, Peter Bergman, Simone Bondesan, Yenan Bryceson, Ingrid Bustos, Oscar Cabrera-Marante, Sheila Carcel, Paol..., Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19, Genome Medicine, 2023, 15 (1), pp.22. ⟨10.1186/s13073-023-01173-8⟩.

Zapletalová M, Rancurel C, Industri B, Bardin M, Le Brigand K, Nicot P, Magnone V, Seassau A, Barbry P, Potěšil D, Zdráhal Z, Ponchet M, Lochman J, BABA-induced pathogen resistance: a multi-omics analysis of the tomato response reveals a hyper-receptive status involving ethylene., Hortic Res 2023 Jun; 10(6): uhad068.

M. Truchi, G. Savary, K. Lebrigand, A. Baeri, C. Girard-Riboulleau, V. Magnone, S. Leroy, V. Hofman, P. Hofman, P. Barbry, S. Bellusci, C. Cauffiez, G. Vassaux, N. Pottier, B. Mari, Single-cell RNA-seq characterization of lung fibrosis resolution reveals a delayed capillary endothelial signature associated with alveolar regeneration in aged mice, J2R-2022 -Reims, Revue des Maladies Respiratoires, 40 (2), pp.142, 2023, ⟨10.1016/j.rmr.2022.11.063⟩.

Feliz Morel ÁJ, Hasanovic A, Morin A, Prunier C, Magnone V, Lebrigand K, Aouad A, Cogoluegnes S, Favier J, Pasquier C, Mus-Veteau I, Persistent Properties of a Subpopulation of Cancer Cells Overexpressing the Hedgehog Receptor Patched., Pharmaceutics 2022 May; 14(5): .

Deprez M, Zaragosi LE, Truchi M, Becavin C, Ruiz García S, Arguel MJ, Plaisant M, Magnone V, Lebrigand K, Abelanet S, Brau F, Paquet A, Pe'er D, Marquette CH, Leroy S, Barbry P, A Single-Cell Atlas of the Human Healthy Airways., Am J Respir Crit Care Med 2020 Dec; 202(12): 1636-1645.

Castagnola S, Cazareth J, Lebrigand K, Jarjat M, Magnone V, Delhaye S, Brau F, Bardoni B, Maurin T, Agonist-induced functional analysis and cell sorting associated with single-cell transcriptomics characterizes cell subtypes in normal and pathological brain., Genome Res 2020 Nov; 30(11): 1633-1642.

Baranek T, Lebrigand K, de Amat Herbozo C, Gonzalez L, Bogard G, Dietrich C, Magnone V, Boisseau C, Jouan Y, Trottein F, Si-Tahar M, Leite-de-Moraes M, Mallevaey T, Paget C, High Dimensional Single-Cell Analysis Reveals iNKT Cell Developmental Trajectories and Effector Fate Decision., Cell Rep 2020 Sep; 32(10): 108116.

Savary G, Dewaeles E, Diazzi S, Buscot M, Nottet N, Fassy J, Courcot E, Henaoui IS, Lemaire J, Martis N, Van der Hauwaert C, Pons N, Magnone V, Leroy S, Hofman V, Plantier L, Lebrigand K, Paquet A, Lino Cardenas CL, Vassaux G, Hofman P, Günther A, Crestani B, Wallaert B, Rezzonico R, Brousseau T, Glowacki F, Bellusci S, Perrais M, Broly F, Barbry P, Marquette CH, Cauffiez C, Mari B, Pottier N, The Long Noncoding RNA DNM3OS Is a Reservoir of FibromiRs with Major Functions in Lung Fibroblast Response to TGF-β and Pulmonary Fibrosis., Am J Respir Crit Care Med 2019 Jul; 200(2): 184-198.

Giovannini-Chami L, Paquet A, Sanfiorenzo C, Pons N, Cazareth J, Magnone V, Lebrigand K, Chevalier B, Vallauri A, Julia V, Marquette CH, Marcet B, Leroy S, Barbry P, The « one airway, one disease » concept in light of Th2 inflammation., Eur Respir J 2018 Oct; 52(4): .

Olivia Magnone, Influence de l’écornage sur le comportement du rhinocéros noir (Diceros bicornis) à l’état sauvage L’Influence of dehorning on the behaviour of the black rhinoceros (Diceros bicornis) into the wild, Médecine vétérinaire et santé animale. 2018.

Alexis Saintamand, Christelle Vincent-Fabert, Marie Marquet, Nour Ghazzaui, Virginie Magnone, Eric Pinaud, Michel Cogné, Yves Denizot, Eμ and 3’RR IgH enhancers show hierarchic unilateral dependence in mature B-cells, Scientific Reports, 2017, 7 (1), pp.442. ⟨10.1038/s41598-017-00575-0⟩.

Medina C, da Rocha M, Magliano M, Ratpopoulo A, Revel B, Marteu N, Magnone V, Lebrigand K, Cabrera J, Barcala M, Silva AC, Millar A, Escobar C, Abad P, Favery B, Jaubert-Possamai S, Characterization of microRNAs from Arabidopsis galls highlights a role for miR159 in the plant response to the root-knot nematode Meloidogyne incognita., New Phytol 2017 Nov; 216(3): 882-896.

Mercey O, Popa A, Cavard A, Paquet A, Chevalier B, Pons N, Magnone V, Zangari J, Brest P, Zaragosi LE, Ponzio G, Lebrigand K, Barbry P, Marcet B, Characterizing isomiR variants within the microRNA-34/449 family., FEBS Lett 2017 Mar; 591(5): 693-705.

Beclin C, Follert P, Stappers E, Barral S, Coré N, Chevigny A, Magnone V, Lebrigand K, Bissels U, Huylebroeck D, Bosio A, Barbry P, Seuntjens E, Cremer H, Corrigendum: miR-200 family controls late steps of postnatal forebrain neurogenesis via Zeb2 inhibition., Sci Rep 2016 Dec; 6(): 39368.

Beclin C, Follert P, Stappers E, Barral S, Coré N, de Chevigny A, Magnone V, Lebrigand K, Bissels U, Huylebroeck D, Bosio A, Barbry P, Seuntjens E, Cremer H, miR-200 family controls late steps of postnatal forebrain neurogenesis via Zeb2 inhibition., Sci Rep 2016 Oct; 6(): 35729.

Alexis Saintamand, Christelle Vincent-Fabert, Armand Garot, Pauline Rouaud, Zéliha Oruc, Virginie Magnone, Michel Cogné, Yves Denizot, Deciphering the importance of the palindromic architecture of the immunoglobulin heavy-chain 3’ regulatory region, Nature Communications, 2016, 7, pp.10730. ⟨10.1038/ncomms10730⟩.

Rouaud P, Fiancette R, Vincent-Fabert C, Magnone V, Cogné M, Dubus P, Denizot Y, Mantle cell lymphoma-like lymphomas in c-myc-3’RR/p53+/- mice and c-myc-3’RR/Cdk4R24C mice: differential oncogenic mechanisms but similar cellular origin., Oncotarget 2012 May; 3(5): 586-93.

Vincent-Fabert C, Fiancette R, Rouaud P, Baudet C, Truffinet V, Magnone V, Guillaudeau A, Cogné M, Dubus P, Denizot Y, A defect of the INK4-Cdk4 checkpoint and Myc collaborate in blastoid mantle cell lymphoma-like lymphoma formation in mice., Am J Pathol 2012 Apr; 180(4): 1688-701.

Fiancette R, Rouaud P, Vincent-Fabert C, Laffleur B, Magnone V, Cogné M, Denizot Y, A p53 defect sensitizes various stages of B cell development to lymphomagenesis in mice carrying an IgH 3′ regulatory region-driven c-myc transgene., J Immunol 2011 Dec; 187(11): 5772-82.

Ganot P, Moya A, Magnone V, Allemand D, Furla P, Sabourault C, Adaptations to endosymbiosis in a cnidarian-dinoflagellate association: differential gene expression and specific gene duplications., PLoS Genet 2011 Jul; 7(7): e1002187.

Puisségur MP, Mazure NM, Bertero T, Pradelli L, Grosso S, Robbe-Sermesant K, Maurin T, Lebrigand K, Cardinaud B, Hofman V, Fourre S, Magnone V, Ricci JE, Pouysségur J, Gounon P, Hofman P, Barbry P, Mari B, miR-210 is overexpressed in late stages of lung cancer and mediates mitochondrial alterations associated with modulation of HIF-1 activity., Cell Death Differ 2011 Mar; 18(3): 465-78.

Emboulé L, Daigle F, Meyer DF, Mari B, Pinarello V, Sheikboudou C, Magnone V, Frutos R, Viari A, Barbry P, Martinez D, Lefrançois T, Vachiéry N, Innovative approach for transcriptomic analysis of obligate intracellular pathogen: selective capture of transcribed sequences of Ehrlichia ruminantium., BMC Mol Biol 2009 Dec; 10(): 111.

L Emboule, F Daigle, R Frutos, D Meyer, Alain Viari, Valérie Pinarello, S Christian, V Magnone, Bernard Mari, P Barbry, D Martinez, Thierry Lefrançois, Nathalie Vachiery, High throughput analysis of Ehrlichia ruminantium transcriptome: identification of genes involved in virulence, 3rd Congress of European Microbiologist - FEMS, 2009, Gothenburg, Sweden. pp.Inconnu.

E Vautor, V Magnone, G Rios, K Le Brigand, Dominique Bergonier, Gérard Lina, H Meugnier, P Barbry, Richard Thiéry, Michel Pepin, Genetic differences among Staphylococcus aureus isolates from dairy ruminant species: A single-dye DNA microarray approach, Veterinary Microbiology, 2009, 133 (1-2), pp.105-114.

Albrecht V, Chevallier A, Magnone V, Barbry P, Vandenbos F, Bongain A, Lefebvre JC, Giordanengo V, Easy and fast detection and genotyping of high-risk human papillomavirus by dedicated DNA microarrays., J Virol Methods 2006 Nov; 137(2): 236-44.

Le Brigand K, Russell R, Moreilhon C, Rouillard JM, Jost B, Amiot F, Magnone V, Bole-Feysot C, Rostagno P, Virolle V, Defamie V, Dessen P, Williams G, Lyons P, Rios G, Mari B, Gulari E, Kastner P, Gidrol X, Freeman TC, Barbry P, An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes., Nucleic Acids Res 2006 Jul; 34(12): e87.

Moreilhon C, Gras D, Hologne C, Bajolet O, Cottrez F, Magnone V, Merten M, Groux H, Puchelle E, Barbry P, Live Staphylococcus aureus and bacterial soluble factors induce different transcriptional responses in human airway cells., Physiol Genomics 2005 Feb; 20(3): 244-55.

Dayem MA, Moreilhon C, Turchi L, Magnone V, Christen R, Ponzio G, Barbry P, Early gene expression in wounded human keratinocytes revealed by DNA microarray analysis., Comp Funct Genomics 2003 ; 4(1): 47-55.

Patel AJ, Maingret F, Magnone V, Fosset M, Lazdunski M, Honoré E, TWIK-2, an inactivating 2P domain K+ channel., J Biol Chem 2000 Sep; 275(37): 28722-30.