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Non mammalian cloned 2P domain K+ Channels


Last update: 26 / 5 / 2005


Table of contents

Genomic and structural properties of non mammalian K2P

 

References for non mammalian K2P

Reviews
Saccharomyces cerevisiae : TOK1 / YKC1 / YORK / DUK1
Drosophila melanogaster : ORK1 (KCNKØ)
Arabidopsis thaliana : KCO1
Caenorhabditis elegans : TWKs
Aplysia californica: AcK2p1, AcK2p2



Please Email me your comments and suggestions (delete the word NOSPAM): duprat@NOSPAMunice.fr


Genomic and structural properties of non mammalian 2P domains K+ channels


Names Amino acids Chromosomal localisation NCBI accession number Species Original cloning paper List of all references
TOK1 (YKC1, YORK, DUK1) 691 . U28005 Saccharomyces cerevisiae Ketchum et al. (1995) List of references
ORK1 (KCNKØ) 618 1 U55321 Drosophila melanogaster Goldstein et al. (1996) List of references
KCO1 363 . X97323 Arabidopsis thaliana Czempinski K et al. (1997) List of references
TWK18 . . . Caenorhabditis elegans Kunkel et al. (2000) List of references

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References for non mammalian channels


Reviews

Abstract NCBIMaser P, Thomine S, Schroeder JI, Ward JM, Hirschi K, Sze H, Talke IN, Amtmann A, Maathuis FJ, Sanders D, Harper JF, Tchieu J, Gribskov M, Persans MW, Salt DE, Kim SA & Guerinot ML (2001)
"Phylogenetic relationships within cation transporter families of Arabidopsis." Plant Physiol. 126(4): 1646-1667.

Abstract NCBIVery AA & Sentenac H. (2003)
"Molecular mechanisms and regulation of K+ transport in higher plants." Annu Rev Plant Biol. 54: 575-603.

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Saccharomyces cerevisiae : TOK1 / YKC1 / YORK / DUK1

Abstract NCBI Ketchum KA, Joiner WJ, Sellers AJ, Kaczmarek LK & Goldstein SA (1995)
“A new family of outwardly rectifying potassium channel proteins with two pore domains in tandem.” Nature 376(6542): 690-695.

Abstract NCBI Zhou XL, Vaillant B, Loukin SH, Kung C & Saimi Y (1995)
"YKC1 encodes the depolarization-activated K+ channel in the plasma membrane of yeast." FEBS Lett 373(2):170-176

Abstract NCBI Reid JD, Lukas W, Shafaatian R, Bertl A, Scheurmann-Kettner C, Guy HR & North RA. (1996)
"The S. cerevisiae outwardly-rectifying potassium channel (DUK1) identifies a new family of channels with duplicated pore domains." Receptors Channels. 4(1): 51-62.

Abstract NCBI Lesage F, Guillemare E, Fink M, Duprat F, Lazdunski M, Romey G & Barhanin J (1996)
“A pH-sensitive yeast outward rectifier K+ channel with two pore domains and novel gating properties.” J Biol Chem 271(8): 4183-4187.

Abstract NCBI Loukin SH, Vaillant B, Zhou XL, Spalding EP, Kung C & Saimi Y. (1997)
"Random mutagenesis reveals a region important for gating of the yeast K+ channel Ykc1." EMBO J. 16(16): 4817-4825.

Abstract NCBI Vergani P, Miosga T, Jarvis SM & Blatt MR (1997)
"Extracellular K+ and Ba2+ mediate voltage-dependent inactivation of the outward-rectifying K+ channel encoded by the yeast gene TOK1", FEBS Lett 405(3): 337-344

Abstract NCBI Gray AT, Winegar BD, Leonoudakis DJ, Forsayeth JR & Yost CS (1998)
"TOK1 is a volatile anesthetic stimulated K+ channel". Anesthesiology 88(4):1076-1084.

Abstract NCBI Bertl A, Bihler H, Reid JD, Kettner C & Slayman CL (1998)
"Physiological characterization of the yeast plasma membrane outward rectifying K+ channel, DUK1 (TOK1), in situ". J Membr Biol 162(1): 67-80.

Abstract NCBI Vergani P, Hamilton D, Jarvis S & Blatt MR (1998)
“Mutations in the pore regions of the yeast K+ channel YKC1 affect gating by extracellular K+.” EMBO J 17(24): 7190-8.

Abstract NCBIYost CS, Gray AT, Winegar BD & Leonoudakis D (1998)
"Baseline K+ channels as targets of general anesthetics: studies of the action of volatile anesthetics on TOK1.", Toxicol Lett. 23, 100-101:293-300.

Abstract NCBI Vergani, P. & M. R. Blatt (1999).
“Mutations in the yeast two pore K+ channel YKC1 identify functional differences between the pore domains.” FEBS Lett 458(3): 285-291.

Abstract NCBI Ahmed A, Sesti F, Ilan N, Shih TM, Sturley SL & Goldstein SA (1999)
"A molecular target for viral killer toxin: TOK1 potassium channels", Cell 99(3): 283-291.

Abstract NCBI Fairman C, Zhou X & Kung C (1999)
"Potassium uptake through the TOK1 K+ channel in the budding yeast", J Membr Biol 168(2): 149-57

Abstract NCBI Kindler CH, Yost CS & Gray AT. (1999)
" Local anesthetic inhibition of baseline potassium channels with two pore domains in tandem." Anesthesiology. 90(4): 1092-1102.

Abstract NCBILoukin SH & Saimi Y (1999)
"K(+)-dependent composite gating of the yeast K(+) channel, Tok1.", Biophys J. 77(6): 3060-3070.

Abstract NCBISesti F, Shih TM, Nikolaeva N & Goldstein SA. (2001)
"Immunity to k1 killer toxin. internal tok1 blockade." Cell 105(5): 637-644.

Abstract NCBISaldana C, Naranjo D, Coria R, Pena A, Vaca L. (2001)
"Splitting the two pore domains from TOK1 results in two cationic channels with novel functional properties." J Biol Chem. 277(7): 4797-4805.

Abstract NCBILoukin SH & Saimi Y (2002)
"Carboxyl Tail Prevents Yeast K(+) Channel Closure: Proposal of an Integrated Model of TOK1 Gating." Biophys J. 82(2): 781-792.

Abstract NCBIRoberts SK. (2003)
"TOK Homologue in Neurospora crassa: First Cloning and Functional Characterization of an Ion Channel in a Filamentous Fungus." Eukaryot Cell. 2(1): 181-190.

Abstract NCBIBaev D, Rivetta A, Li XS, Vylkova S, Bashi E, Slayman CL & Edgerton M (2003)
"Killing of Candida albicans by Human Salivary Histatin 5 Is Modulated, but Not Determined, by the Potassium Channel TOK1." Infect Immun. 71(6): 3251-3260.

Abstract NCBIJohansson I & Blatt MR (2005)
"Interactive domains between pore loops of the yeast K + channel TOK1 associate with extracellular K + sensitivity." Biochem J. Nov 16; [Epub ahead of print]

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Drosophila melanogaster : ORK1 (KCNKØ)

Abstract NCBI Goldstein SAN, Price LA, Rosenthal DN & Pausch MH (1996)
"ORK1, a potassium-selective leak channel with two pore domains cloned from Drosophila melanogaster by expression in Saccharomyces cerevisiae." Proc Natl Acad Sci U S A. 93(23):13256-13261.

Abstract NCBI Zilberberg N, Ilan N, Gonzalez-Colaso R & Goldstein SAN (2000)
"Opening and closing of KCNKØ potassium leak channels is tightly regulated", J Gen Physiol 116(5): 721-734.

Abstract NCBIIlan N & Goldstein SAN (2001)
"KCNKØ: Single, Cloned Potassium Leak Channels Are Multi-Ion Pores.", Biophys J. 80(1): 241-253.

Abstract NCBIZilberberg N, Ilan N & Goldstein SAN (2001)
"KCNKØ: Opening and Closing the 2-P-Domain Potassium Leak Channel Entails "C-Type" Gating of the Outer Pore.", Neuron 32 (4): 635-648.

Note: The human nomenclature KCNKØ has been wrongly use in these papers for a D. melanogaster channel, trying to force this non mammalian channel as the first cloned mammalian 2P domain K+ channel.


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Arabidopsis thaliana : KCO1

Abstract NCBI Czempinski K, Zimmermann S, Ehrhardt T & Muller-Rober B (1997)
“New structure and function in plant K+ channels: KCO1, an outward rectifier with a steep Ca2+ dependency .” EMBO J 16(10): 2565-75.

Abstract NCBISchonknecht G, Spoormaker P, Steinmeyer R, Bruggeman L, Ache P, Dutta R, Reintanz B, Godde M, Hedrich R & Palme K (2002)
"KCO1 is a component of the slow-vacuolar (SV) ion channel." FEBS Lett. 511(1-3): 28-32.

Abstract NCBI Czempinski K, Frachisse JM, Maurel C, Barbier-Brygoo H & Mueller-Roeber B. (2002)
"Vacuolar membrane localization of the Arabidopsis 'two-pore' K+ channel KCO1." Plant J. 29(6): 809-820.

Abstract NCBIBecker D, Geiger D, Dunkel M, Roller A, Bertl A, Latz A, Carpaneto A, Dietrich P, Roelfsema MR, Voelker C, Schmidt D, Mueller-Roeber B, Czempinski K & Hedrich R (2004)
"AtTPK4, an Arabidopsis tandem-pore K+ channel, poised to control the pollen membrane voltage in a pH- and Ca2+-dependent manner." Proc Natl Acad Sci U S A [Epub ahead of print].

Abstract NCBIAubourg S, Brunaud V, Bruyere C, Cock M, Cooke R, Cottet A, Couloux A, Dehais P, Deleage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, Geourjon C, Grienenberger JM, Houlne G, Jamet E, Lechauve F, Leleu O, Leroy P, Mache R, Meyer C, Nedjari H, Negrutiu I, Orsini V, Peyretaillade E, Pommier C, Raes J, Risler JL, Riviere S, Rombauts S, Rouze P, Schneider M, Schwob P, Small I, Soumayet-Kampetenga G, Stankovski D, Toffano C, Tognolli M, Caboche M & Lecharny A (2005)
"GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts." Nucleic Acids Res 33(Database Issue): D641-D646.

See also the web site: http://genoplante-info.infobiogen.fr/Genefarm/


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Caenorhabditis elegans : TWKs

Abstract NCBIWei A, Jegla T & Salkoff L (1996)
"Eight potassium channel families revealed by the C. elegans genome project." Neuropharmacology 35(7): 805-829.

Abstract NCBI Kunkel MT, Johnstone DB, Thomas JH & Salkoff L (2000)
"Mutants of a temperature-sensitive two-P domain potassium channel" J Neurosci 20: 7517-7524

Abstract NCBISalkoff L, Butler A, Fawcett G, Kunkel M, McArdle C, Paz-y-Mino G, Nonet M, Walton N, Wang ZW, Yuan A & Wei A (2001)
"Evolution tunes the excitability of individual neurons. Neuroscience." 103(4): 853-859.


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Aplysia californica: AcK2p1, AcK2p2

Abstract NCBIJezzini SH & Moroz LL. (2004)
"Identification and distribution of a two-pore domain potassium channel in the CNS of Aplysia californica." Mol Brain Res. 127(1-2): 27-38.

Abstract NCBIJezzini SH, Reagin S, Kohn AB, & Moroz LL. (2006)
"Molecular characterization and expression of a two-pore domain potassium channel in the CNS of Aplysia californica." Brain Res. 1094(1): 47-56;

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