Home page
Home page

Nomenclature of the potassium channel superfamily


Last update: 16 / 12 / 2003


 

Mammalian K+ channels

Dendrogram of the 71 cloned mammalian K+ channels :

Legend: TM; Transmembrane segment, P; pore domain



Table of content


FAMILIES:

KCNA Voltage dependent: shaker related KCNH Voltage dependent: eag related
KCNAB Voltage dependent: ß subunit KCNJ Inward rectifier
KCNB Voltage dependent: shab related KCNK Background channels
KCNC Voltage dependent: shaw related KCNM Calcium activated: large conductance
KCNDVoltage dependent: shal related KCNN Calcium activated: intermediate and small conductance
KCNEVoltage dependent: IsK related KCNQ Voltage dependent: KQT related
KCNF Voltage dependent: auxillary subunit KCNS Voltage dependent: auxillary subunit
KCNG Voltage dependent: auxillary subunit .

 

Sources:

UCL (London) web site: The potassium channel gene family nomenclature

Abstract NCBIGutman GA, Chandy KG, Adelman JP, Aiyar J, Bayliss DA, Clapham DE, Covarriubias M, Desir GV, Furuichi K, Ganetzky B, Garcia ML, Grissmer S, Jan LY, Karschin A, Kim D, Kuperschmidt S, Kurachi Y, Lazdunski M, Lesage F, Lester HA, McKinnon D, Nichols CG, O'Kelly I, Robbins J, Robertson GA, Rudy B, Sanguinetti M, Seino S, Stuehmer W, Tamkun MM, Vandenberg CA, Wei A, Wulff H, & Wymore RS (2003)
"International Union of Pharmacology. XLI. Compendium of Voltage-Gated Ion Channels: Potassium Channels." Pharmacol Rev 55(4): 583-586.

.


KCNA FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4

Voltage dependent: shaker related
Human gene names

Channel names

(IUPHAR)

Other names Chromosomal localization
KCNA1 Kv1.1 RBK1, HUK(1), MBK1, RCK1, MK1, HBK1, AEMK 12p13.3
KCNA2 Kv1.2 MK2, RCK5, NGK1, HuK(IV), BK2, BGK5, XSha2, HBK5, RAK, HK4

1p13

KCNA3 Kv1.3 MK3, HLK3, hPCN3, RCK3, RGK5, KV3, MBK3, HuK(III), HGK5, n-channel 1p13.3
KCNA4 Kv1.4 RCK4, RHK1, HuK(II), HK1, hPCN2, RK4, RK8, MK4 11p14.3-15.2
KCNA5 Kv1.5 HK2, hPCN1, KV1, RK3, HCK1, fHK, RMK2, HuK(II) 12p13.3
KCNA6 Kv1.6 HBK2, RCK2, KV2, MK1.6 12p13.3
KCNA7 Kv1.7 HAK6, MK6 19q13.3
KCNA9 withdrawn, see KCNQ1 - -
KCNA10 Kv1.8 Kcn1, KCNA10, Kv1.10 1p13.3-22.1

Back to beginning


Voltage dependent: ß subunit
Human gene names Channel names Other names Chromosomal localization
KCNAB1 KvBeta3 KCNA1B, hKvb3, Kvb1.3 3q26.1
KCNAB2 KvBeta2 KCNA2B, Kvb2.1, Kvb2.2 1p36.3
KCNAB3 KCNAB3 17p13.1

Back to beginning


KCNB FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent: shab related
Human gene names Channel names Other names Chromosomal localization
KCNB1 Kv2.1 hDRK1, DHK1, MShab, DRK1 20q13.11-13.13
KCNB2 Kv2.2 CDRK 8q12-13
KCNB3 Kv8.1 Kv2.3, HNKA 8q22.3-22.4

Back to beginning


KCNC FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent: shaw related
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNC1 Kv3.1 NGK2, KV4, Raw2, Raw2a, 11p14.3-15.2
KCNC2 Kv3.2 RKShIIIA, Raw1, Kv3.2a, rKv3.2b, rKv3.2c 19q13.3-q13.4
KCNC3 Kv3.3 RKShIIID, Kv3.3b 19q13.3
KCNC4 Kv3.4 HKShIIIC, Raw3 1p21

Back to beginning


KCND FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4

Voltage dependent: shal related
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCND1 Kv4.1 mShal, RShal Xp11.23
KCND2 Kv4.2 Shal1, RK5 7q31
KCND3 Kv4.3 - 1p13

Back to beginning


KCNE FAMILY


Structure: 1 Transmembrane segment

 

Voltage dependent: IsK related
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNE1 - minK/Isk 21q22.1-q22.2
KCNE2 - MiRP1 21q22.1
KCNE3 - MiRP2 -
KCNE4 - MiRP3 -
KCNE1L - AMMECR2 Xq22.3

Back to beginning


KCNF, KCNG FAMILIES


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4

Voltage dependent: auxillary subunit
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNF1 Kv5.1 IK8, KH1, KCNF1 2p25
KCNG1 Kv6.1 K13, KH2 20q13
KCNG2 Kv6.2 KCNF2 18q22-18q23
KCNG3 Kv6.3 Kv10.1 2p21
KCNG4 Kv6.4 Kv6.3 16q24.1

Back to beginning


KCNH FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4

Voltage dependent: eag related
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNH1 Kv10.1 eag1a, eag1b, KCNH1a, KCNH1b, meag, reag 1q32.1-32.3
KCNH2 Kv11.1 erg1, herg, LQT2, HERG, Hergb 7q35-36
KCNH3 Kv12.2 BEC1, Elk2 12q13
KCNH4 Kv12.3 BEC2, elk1 17q21.31
KCNH5 Kv10.2 eag2 14q24.3
KCNH6 Kv11.2 erg2, herg2 17
KCNH7 Kv11.3 erg3, herg3 2q24.3
KCNH8 Kv12.1 elk1, elk3 3p24.3

Back to beginning


KCNJ FAMILY


Assembly: 2 Transmembrane segments 1 P domain K+ channels x4

 

Inward rectifier
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNJ1 Kir1.1 ROMK1 11q24
KCNJ2 Kir2.1 IRK1 17q23.1-24.2
KCNJ3 Kir3.1 GIRK1, KGA 2q24.1
KCNJ4 Kir2.3 IRK3, HIR, HRK1, hIRK2 22q13.1
KCNJ5 Kir3.4 CIR, KATP1, GIRK4 11q23
KCNJ6 Kir3.2b, Kir3.2d BIR1, GIRK2B, GIRK2D, KATP2 21q22.1
KCNJ7 withdrawn, see KCNJ6 - -
KCNJ8 Kir6.1 uKATP-1 12p11.23
KCNJ9 Kir3.3 GIRK3 1q21-23
KCNJ10 Kir4.1, Kir1.2 BIR10, KAB-2 1q22-23
KCNJ11 Kir6.2 BIR 11p15.1
KCNJ12 Kir2.2 IRK2 17p11.1
KCNJ13 Kir7.1, Kir1.4 - 2q37
KCNJ14 Kir2.4 IRK4 19q13.1-13.3
KCNJ15 Kir4.2, Kir1.3 ROMK3 21q22.2
KCNJ16 Kir5.1 BIR9 17q23.1-24.2
KCNJN1 Kir2.2v - 17p11.2-p11.1

Back to beginning


KCNK FAMILY


Assembly: 4 Transmembrane segments 2 P domain K+ channels x2

 

Visit my web site on "Background" or "Leak" or "K2P" or "Tandem pore" or "Two P domain" Potassium Channels

 

Background channels
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNK1 K2p1.1 TWIK-1, hOHO, DPK 1q42-43
KCNK2 K2p2.1 TREK-1, TPKC1 1q41
KCNK3 K2p3.1 TASK-1, TBAK-1, OAT-1 2p23.3-24.1
KCNK4 K2p4.1 TRAAK 11q13
KCNK5 K2p5.1 TASK-2 6p21
KCNK6 K2p6.1 TWIK-2, TOSS 19q13.1
KCNK7 K2p7.1 kcnk8 11q13
KCNK8 reserved - -
KCNK9 K2p9.1 TASK-3 8q24.3
KCNK10 K2p10.1 TREK-2 14q31
KCNK11 reserved - -
KCNK12 K2p12.1 THIK-2 2p22-21
KCNK13 K2p13.1 THIK-1 14q24.1-24.3
KCNK14 reserved - -
KCNK15 K2p15.1 TASK-5, KT3.3 20q12
KCNK16 K2p16.1 TALK-1 6p21.1-21.2
KCNK17 K2p17.1 TALK-2, TASK-4 6p21.1-21.2
- - TRESK 10

Back to beginning


KCNM FAMILY


Calcium-activated: large conductance
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNMA1 KCa1.1 slo, BK, maxi K+ 10q22
KCNMB1 - hslo-beta 5q34
KCNMB2 - - 3q26.2-q27.1
KCNMB3 - - 3q26.3-q27
KCNMB3L -   22q11
KCNMB4 - - 12q

Back to beginning


KCNN FAMILY


Assembly: 6 Transmembrane segment6 Transmembrane segments 1 P domain K+ channels x4

 

Calcium-activated: intermediate and small conductance
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNN1 KCa2.1 SK1, SKCa1 19p13.1
KCNN2 KCa2.2 SK2, SKCa2 5q23.1-23.2
KCNN3 KCa2.3 SK3, SKCa3, hKCa3 1q21.3
KCNN4 KCa3.1 SK4, Kca4, IKCa1, IK1 19q13.2

Back to beginning


KCNQ FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent: KQT related
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNQ1 Kv7.1 KCNA9, KVLQT1, LQT1 11p15.5
KCNQ2 Kv7.2 KvEBN1 20q13.3
KCNQ3 Kv7.3 KvEBN2 8q24.22-q24.3
KCNQ4 Kv7.4 - 1p34
KCNQ5 Kv7.5 - 6q14

Back to beginning


KCNS FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNS1 Kv9.1 - 20q12-13.2
KCNS2 Kv9.2 - 8q22
KCNS3 Kv9.3 - 2p24

Back to beginning


KCNT FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNT1 KCa4.1 - 9q34.3
KCNT2 KCa4.2 Slack, Slo2 1q31.3

Back to beginning


KCNU FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNU1 KCa5.1 - 8p11.22

Back to beginning


KCNV FAMILY


Assembly: 6 Transmembrane segments 1 P domain K+ channels x4


Voltage dependent
Human gene names Channel names (IUPHAR) Other names Chromosomal localization
KCNV1 Kv8.1 KCNB3, Kv2.3 8q22.3-8q24.1
KCNV2 Kv8.2 - 9p24.2

Back to beginning


Sources:

UCL (London) web site: The potassium channel gene family nomenclature

International Union of Pharmacology (IUPHAR): "Compendium of Voltage-gated Ion Channels", IUPHAR Media Editor



Home page
Home page